MolNFT v1 · #138405 · protein
Structure of acinetobacter baumannii carbapenemase oxa-239 K82D bound to doripenem
5WI7: “Structure of acinetobacter baumannii carbapenemase oxa-239 K82D bound to doripenem”. X-ray diffraction, 1 ligand (4J6). MolNFT v1 #138405 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WI7
- Type
- protein
- Length
- 476 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- I6YCI1
- Ligands
- 4J6
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 243 | — | I6YCI1 |
| B | — | protein | 233 | — | I6YCI1 |
Ligands and binding sites
- 4J6 · (4R,5S)-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-3-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-4,5-dihydro-1H-pyrrole-2-carboxylic acid · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5WI7 · Structure of Acinetobacter baumannii carbapenemase OXA-239 K82D bound to doripenem · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I6YCI1
- Elsewhere: RCSB PDB 5WI7 · PDBe 5WI7 · UniProt I6YCI1
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