MolNFT v1 · #138231 · protein
Caulobacter crescentus pol III beta
5WCE · DNA polymerase III subunit beta: “Caulobacter crescentus pol III beta”. X-ray diffraction, 4 pockets (best druggability 0.42). MolNFT v1 #138231 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WCE
- Type
- protein
- Length
- 739 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA polymerase III subunit beta
- EC
- 2.7.7.7
- UniProt
- P0CAU5
- Pockets
- 4 · best druggability 0.42
Structure
x-ray diffraction · 2 distinct chains · 21% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase III subunit beta (EC 2.7.7.7) | protein | 370 | 21% helix, 43% strand | P0CAU5 |
| B | DNA polymerase III subunit beta (EC 2.7.7.7) | protein | 369 | 22% helix, 43% strand | P0CAU5 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 108 | 0.42 | 0.77 | 22 | empty |
| 2 | 64 | 0.31 | 0.75 | 17 | empty |
| 3 | 62 | 0.31 | 0.75 | 17 | empty |
| 4 | 52 | 0.28 | 0.75 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 1293 Ų buried · 34 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CAU5
- Elsewhere: RCSB PDB 5WCE · PDBe 5WCE · UniProt P0CAU5
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