MolNFT v1 · #138005 · protein
Agrobacterium tumefaciens ADP-glucose pyrophosphorylase P96A mutant bound to activator pyruvate
5W5R: “Agrobacterium tumefaciens ADP-glucose pyrophosphorylase P96A mutant bound to activator pyruvate”. X-ray diffraction, 2 ligands (PYR, SO4). MolNFT v1 #138005 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5W5R
- Type
- protein
- Length
- 8,229 residues
- Chains
- 20
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P39669
- Ligands
- PYR, SO4
Structure
x-ray diffraction · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 415 | — | P39669 |
| B, C, J, N, T, U | — | protein | 415 | — | P39669 |
| D | — | protein | 412 | — | P39669 |
| E, H, I, P, Q, R | — | protein | 409 | — | P39669 |
| K, L | — | protein | 410 | — | P39669 |
| O | — | protein | 411 | — | P39669 |
| F | — | protein | 408 | — | P39669 |
| G | — | protein | 410 | — | P39669 |
| M | — | protein | 409 | — | P39669 |
Ligands and binding sites
- PYR · Pyruvic acid · ligand · 9 copies · chains A, P, D, M, E, H, G, C, I, J, B, K, Q, F, T, U
- SO4 · Sulfate ion · ion · 42 copies · chains A, B, C, D, E, H, I, J, K, L, N, O, P, Q, R, F, G, M, T, U
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5W5R · Agrobacterium tumefaciens ADP-glucose pyrophosphorylase P96A mutant bound to activator… · the same entry in another collection · chain L against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P39669
- Elsewhere: RCSB PDB 5W5R · PDBe 5W5R · UniProt P39669
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.