MolNFT v1 · #137977 · protein
Crystal structure of riboflavin lyase (rcae) with modified FMN and substrate riboflavin
5W4Z: “Crystal structure of riboflavin lyase (rcae) with modified FMN and substrate riboflavin”. X-ray diffraction, 2 ligands (9WY, RBF). MolNFT v1 #137977 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5W4Z
- Type
- protein
- Length
- 893 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- 9WY, RBF
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 446 | — | — |
| B | — | protein | 447 | — | — |
Ligands and binding sites
- 9WY · 1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)-3-O-phosphono-D-ribitol · ligand · 2 copies · chains A, B
- RBF · Riboflavin · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5W4Z · Crystal Structure of Riboflavin Lyase (RcaE) with modified FMN and substrate Riboflavin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5W4Z · PDBe 5W4Z
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