MolNFT v1 · #137863 · protein
Macv GP1 CR1-07 Fab complex
5W1M: “Macv GP1 CR1-07 Fab complex”. X-ray diffraction, 2 ligands (NAG, BMA). MolNFT v1 #137863 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5W1M
- Type
- protein
- Length
- 2,360 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q0KKI6, Q6N089, Q8AZ57
- Ligands
- NAG, BMA
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E | — | protein | 221 | — | Q0KKI6 |
| B, F | — | protein | 218 | — | Q6N089 |
| D | — | protein | 220 | — | Q6N089 |
| G | — | protein | 219 | — | Q0KKI6 |
| H | — | protein | 219 | — | Q6N089 |
| Q, S | — | protein | 151 | — | Q8AZ57 |
| R | — | protein | 152 | — | Q8AZ57 |
| T | — | protein | 149 | — | Q8AZ57 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 7 copies · chains Q, R, S, T
- BMA · beta-D-mannopyranose · sugar · 2 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5W1M · MACV GP1 CR1-07 Fab complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0KKI6
- Every structure of UniProt Q6N089
- Every structure of UniProt Q8AZ57
- Elsewhere: RCSB PDB 5W1M · PDBe 5W1M · UniProt Q0KKI6 · UniProt Q6N089 · UniProt Q8AZ57
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