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MolNFT v1 · #137730 · protein

Crystal structure of xanthomonas campestris olea E117D

5VXH: “Crystal structure of xanthomonas campestris olea E117D”. X-ray diffraction, 1 ligand (PO4). MolNFT v1 #137730 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5VXH
Type
protein
Length
671 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q8PDX2
Ligands
PO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein345—Q8PDX2
B—protein326—Q8PDX2

Ligands and binding sites

  • PO4 · Phosphate ion · ion · chains A
  • GOL · Glycerol · additive · 4 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5VXH · Crystal structure of Xanthomonas campestris OleA E117D · the same entry in another collection · chain A against A, TM-score 1.00
  • Q8PDX2 · AlphaFold monomer V2.0 prediction for acyl-COA:ACYL-CoA alkyltransferase (Q8PDX2) · a predicted model of the same protein · chain B against A, TM-score 0.99

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