MolNFT v1 · #137702 · protein
Ornithine aminotransferase inactivated by (1R,3S,4S)-3-amino-4- fluorocyclopentane-1-carboxylic acid (fcp)
5VWO: “Ornithine aminotransferase inactivated by (1R,3S,4S)-3-amino-4- fluorocyclopentane-1-carboxylic acid (fcp)”. X-ray diffraction, 1 ligand (9QJ). MolNFT v1 #137702 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VWO
- Type
- protein
- Length
- 1,212 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04181
- Ligands
- 9QJ
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 404 | — | P04181 |
Ligands and binding sites
- 9QJ · (1S,3S,4E)-3-({3-hydroxy-2-methyl-5-[(phosphonooxy) methyl]pyridin-4-yl}methyl)-4-iminocyclopentane-1-carboxylic acid · ligand · 3 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VWO · Ornithine aminotransferase inactivated by (1R,3S,4S)-3-amino-4-fluorocyclopentane-1-carbox… · the same entry in another collection · chain A against A, TM-score 1.00
- P04181 · AlphaFold monomer V2.0 prediction for ornithine aminotransferase, mitochondrial (P04181) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04181
- Elsewhere: RCSB PDB 5VWO · PDBe 5VWO · UniProt P04181
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