MolNFT v1 · #137576 · protein
Crystal structure of inosine 5'-monophosphate dehydrogenase from clostridium perfringens complexed with imp and P225
5VSV: “Crystal structure of inosine 5'-monophosphate dehydrogenase from clostridium perfringens complexed with imp…”. X-ray diffraction, 2 ligands (IMP, 8KY). MolNFT v1 #137576 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VSV
- Type
- protein
- Length
- 1,368 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A127ELD1
- Ligands
- IMP, 8KY
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 343 | — | A0A127ELD1 |
| B | — | protein | 341 | — | A0A127ELD1 |
| C | — | protein | 343 | — | A0A127ELD1 |
| D | — | protein | 341 | — | A0A127ELD1 |
Ligands and binding sites
- IMP · Inosinic acid · ligand · 4 copies · chains A, B, C, D
- 8KY · {2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}carbamoyl)amino]phenoxy}acetic acid · ligand · 4 copies · chains A, C, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VSV · Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens… · the same entry in another collection · chain C against C, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A127ELD1
- Elsewhere: RCSB PDB 5VSV · PDBe 5VSV · UniProt A0A127ELD1
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