GL1X · GenesisL1 explorer

MolNFT v1 · #137544 · protein

2.05 ångström resolution crystal structure of C-terminal domain (DUF2156) of putative lysylphosphatidylglycerol synthetase from agrobacterium fabrum.

5VRV: “2.05 ångström resolution crystal structure of C-terminal domain (DUF2156) of putative…”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #137544 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5VRV
Type
protein
Length
1,899 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
A9CHP8
Ligands
SO4

Structure

x-ray diffraction · 6 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein319—A9CHP8
B—protein316—A9CHP8
C—protein316—A9CHP8
D—protein315—A9CHP8
E—protein316—A9CHP8
F—protein317—A9CHP8

Ligands and binding sites

  • SO4 · Sulfate ion · ion · chains E, F
  • GOL · Glycerol · additive · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5VRV · 2.05 Angstrom Resolution Crystal Structure of C-terminal Domain (DUF2156) of Putative… · the same entry in another collection · chain A against A, TM-score 1.00

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