MolNFT v1 · #137458 · protein
Crystal structure of HCV NS3/4A protease in complex with am-07, an analogue of 5172-MCP1P3
5VP9: “Crystal structure of HCV NS3/4A protease in complex with am-07, an analogue of 5172-MCP1P3”. X-ray diffraction, 3 ligands (9H7, ZN, SO4). MolNFT v1 #137458 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VP9
- Type
- protein
- Length
- 198 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A8DG50
- Ligands
- 9H7, ZN, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 198 | — | A8DG50 |
Ligands and binding sites
- 9H7 · Tert-butyl [(2r,6s,12z,13as,14ar,16as)-14A-[(cyclopropylsulfonyl)carbamoyl]-5,16-dioxo-2-{[3-(thiophen-2-yl)quinoxalin-2-yl]oxy}-1,2,3,5,6,7,8,9, 10,11,13A,14,14A,15,16,16A-hexadecahydrocyclopropa[e]pyrrolo[1,2-A][1, 4]diazacyclopentadecin-6-yl]carbamate · ligand · chains A
- ZN · Zinc ion · metal · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VP9 · Crystal structure of HCV NS3/4A protease in complex with AM-07, an analogue of 5172-mcP1P3 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8DG50
- Elsewhere: RCSB PDB 5VP9 · PDBe 5VP9 · UniProt A8DG50
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