MolNFT v1 · #137357 · protein
The hapten triclocarban bound to the single domain camelid nanobody vhh T10
5VM6: “The hapten triclocarban bound to the single domain camelid nanobody vhh T10”. X-ray diffraction, 3 ligands (9EG, NA, SO4). MolNFT v1 #137357 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VM6
- Type
- protein
- Length
- 129 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- 9EG, NA, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 129 | — | — |
Ligands and binding sites
- 9EG · N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea · ligand · chains A
- NA · Sodium ion · metal · chains A
- SO4 · Sulfate ion · ion · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VM6 · The hapten triclocarban bound to the single domain camelid nanobody VHH T10 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5VM6 · PDBe 5VM6
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