MolNFT v1 · #137326 · protein

Accidental minimum contact crystal lattice formed by a redesigned protein oligomer

5VL4 · T33-53H-B: “Accidental minimum contact crystal lattice formed by a redesigned protein oligomer”. X-ray diffraction, 1 pocket (best druggability 0.37). MolNFT v1 #137326 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5VL4
Type: protein
Length: 149 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: T33-53H-B
Pockets: 1 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 74% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	T33-53H-B	protein	149	74% helix, 1% strand	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	69	0.37	0.78	15	empty

Compared structures

5VL4 · Accidental minimum contact crystal lattice formed by a redesigned protein oligomer · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 5VL4 · PDBe 5VL4

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