MolNFT v1 · #137306 · protein
Closed conformation of kcsa Y82A-F103A mutant
5VKH: “Closed conformation of kcsa Y82A-F103A mutant”. X-ray diffraction, 3 ligands (F09, 1EM, K). MolNFT v1 #137306 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VKH
- Type
- protein
- Length
- 534 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0A334
- Ligands
- F09, 1EM, K
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 219 | — | — |
| B | — | protein | 212 | — | — |
| C | — | protein | 103 | — | P0A334 |
Ligands and binding sites
- F09 · Nonan-1-ol · ligand · chains A, C
- 1EM · (1S)-2-hydroxy-1-[(nonanoyloxy)methyl]ethyl myristate · ligand · chains C
- K · Potassium ion · metal · 6 copies · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VKH · Closed conformation of KcsA Y82A-F103A mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A334
- Elsewhere: RCSB PDB 5VKH · PDBe 5VKH · UniProt P0A334
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