MolNFT v1 · #137286 · protein
De novo photosynthetic reaction center protein variant equipped with his-tyr H-bond, heme B, and CD(II) ions
5VJU: “De novo photosynthetic reaction center protein variant equipped with his-tyr H-bond, heme B, and CD(II) ions”. X-ray diffraction, 2 ligands (HEM, CD). MolNFT v1 #137286 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VJU
- Type
- protein
- Length
- 196 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- HEM, CD
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 196 | — | — |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
- CD · Cadmium ion · metal · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VJU · De Novo Photosynthetic Reaction Center Protein Variant Equipped with His-Tyr H-bond, Heme… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5VJU · PDBe 5VJU
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