MolNFT v1 · #137131 · protein
Crystal structure of phosphoribosylamine-glycine ligase from neisseria gonorrhoeae
5VEV: “Crystal structure of phosphoribosylamine-glycine ligase from neisseria gonorrhoeae”. X-ray diffraction, 2 ligands (NA, SO4). MolNFT v1 #137131 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VEV
- Type
- protein
- Length
- 813 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B4RPN9
- Ligands
- NA, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 406 | — | B4RPN9 |
| B | — | protein | 407 | — | B4RPN9 |
Ligands and binding sites
- NA · Sodium ion · metal · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 3 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 13 copies · chains A, B
- ACT · Acetate ion · additive · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VEV · Crystal Structure of Phosphoribosylamine-glycine Ligase from Neisseria gonorrhoeae · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4RPN9
- Elsewhere: RCSB PDB 5VEV · PDBe 5VEV · UniProt B4RPN9
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