MolNFT v1 · #136873 · protein
Crystal structure of the second beta-prism domain of rbmc from V. cholerae bound to mannotriose
5V6F: “Crystal structure of the second beta-prism domain of rbmc from V. cholerae bound to mannotriose”. X-ray diffraction, 3 ligands (MAN, BMA, SO4). MolNFT v1 #136873 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5V6F
- Type
- protein
- Length
- 137 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9KTH2
- Ligands
- MAN, BMA, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 137 | — | Q9KTH2 |
Ligands and binding sites
- MAN · alpha-D-mannopyranose · sugar · 2 copies · chains A
- BMA · beta-D-mannopyranose · sugar · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5V6F · Crystal Structure of the Second beta-Prism Domain of RbmC from V. cholerae bound to… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KTH2
- Elsewhere: RCSB PDB 5V6F · PDBe 5V6F · UniProt Q9KTH2
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