MolNFT v1 · #136750 · protein
Crystal structure of glycoprotein B from herpes simplex virus type I
5V2S: “Crystal structure of glycoprotein B from herpes simplex virus type I”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #136750 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5V2S
- Type
- protein
- Length
- 705 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A1Z0P7
- Ligands
- NAG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 705 | — | A1Z0P7 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5V2S · Crystal structure of glycoprotein B from Herpes Simplex Virus type I · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1Z0P7
- Elsewhere: RCSB PDB 5V2S · PDBe 5V2S · UniProt A1Z0P7
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