MolNFT v1 · #136613 · protein

Yfea with metal bound to site 2 - mn wavelength

5UYH · Periplasmic chelated iron-binding protein yfea: “Yfea with metal bound to site 2 - mn wavelength”. X-ray diffraction, 1 ligand (MN). MolNFT v1 #136613 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5UYH
Type: protein
Length: 272 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Periplasmic chelated iron-binding protein yfea
UniProt: Q56952
Ligands: MN

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Periplasmic chelated iron-binding protein yfea	protein	272	44% helix, 14% strand	Q56952

Ligands and binding sites

MN · Manganese (II) ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5UYH · YfeA with metal bound to site 2 - Mn wavelength · the same entry in another collection · chain A against A, TM-score 1.00
Q56952 · AlphaFold monomer V2.0 prediction for periplasmic chelated iron- binding protein yfea… · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q56952
Elsewhere: RCSB PDB 5UYH · PDBe 5UYH · UniProt Q56952

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