MolNFT v1 · #136465 · protein
2.65 ångström resolution crystal structure of S-adenosylhomocysteinase from cryptosporidium parvum in complex with sah and NAD
5UTU: “2.65 ångström resolution crystal structure of S-adenosylhomocysteinase from cryptosporidium parvum in complex…”. X-ray diffraction, 4 ligands (NAD, ADN, SO4). MolNFT v1 #136465 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 5UTU
- Type
- protein
- Length
- 3,949 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5CPH1
- Ligands
- NAD, ADN, SO4, CL
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 495 | — | Q5CPH1 |
| C | — | protein | 492 | — | Q5CPH1 |
| D, F | — | protein | 494 | — | Q5CPH1 |
| E | — | protein | 495 | — | Q5CPH1 |
| G | — | protein | 496 | — | Q5CPH1 |
| H | — | protein | 488 | — | Q5CPH1 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- ADN · Adenosine · ligand · 2 copies · chains F, H
- SO4 · Sulfate ion · ion · 22 copies · chains A, C, B, D, E, G, F, H
- CL · Chloride ion · ion · 11 copies · chains A, B, C, D, G, E, F, H
- P33 · 3,6,9,12,15,18-hexaoxaicosane-1,20-diol · additive · 3 copies · chains A, B, G, H
- P6G · Hexaethylene glycol · additive · 2 copies · chains C, D, E, F
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UTU · 2.65 Angstrom Resolution Crystal Structure of S-adenosylhomocysteinase from… · the same entry in another collection · chain G against G, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5CPH1
- Elsewhere: RCSB PDB 5UTU · PDBe 5UTU · UniProt Q5CPH1
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