MolNFT v1 · #136460 · protein
Crystal structure of burkholderia cenocepacia family 3 glycoside hydrolase (nagz) bound to N-ethylbutyryl-pugnac
5UTP: “Crystal structure of burkholderia cenocepacia family 3 glycoside hydrolase (nagz) bound to…”. X-ray diffraction, 1 ligand (8M7). MolNFT v1 #136460 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UTP
- Type
- protein
- Length
- 666 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A125HFC0
- Ligands
- 8M7
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 331 | — | A0A125HFC0 |
| B | — | protein | 335 | — | A0A125HFC0 |
Ligands and binding sites
- 8M7 · N-[(2Z,3R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-{[(phenylcarbamoyl)oxy]imino}tetrahydro-2H-pyran-3-yl]-2-ethylbutanamide · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UTP · Crystal structure of Burkholderia cenocepacia family 3 glycoside hydrolase (NagZ) bound… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A125HFC0
- Elsewhere: RCSB PDB 5UTP · PDBe 5UTP · UniProt A0A125HFC0
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