MolNFT v1 · #136368 · protein
Crystal structure of 2-methylcitrate synthase from aspergillus fumigatus
5UQR: “Crystal structure of 2-methylcitrate synthase from aspergillus fumigatus”. X-ray diffraction, 3 ligands (OAA, 8JD, NA). MolNFT v1 #136368 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UQR
- Type
- protein
- Length
- 874 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q50I20
- Ligands
- OAA, 8JD, NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 439 | — | Q50I20 |
| B | — | protein | 435 | — | Q50I20 |
Ligands and binding sites
- OAA · Oxaloacetate ion · ligand · 2 copies · chains A, B
- 8JD · [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (3R)-4-[(3-{[2-(ethylsulfanyl)ethyl]amino}-3-oxopropyl)amino]-3-hydroxy-2,2-dimethyl-4-oxobutyl dihydrogen diphosphate (non-preferred name) · ligand · chains A, B
- NA · Sodium ion · metal · 3 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UQR · Crystal structure of 2-methylcitrate synthase from Aspergillus fumigatus · the same entry in another collection · chain A against A, TM-score 1.00
- Q50I20 · AlphaFold monomer V2.0 prediction for 2-methylcitrate synthase, mitochondrial (Q50I20) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q50I20
- Elsewhere: RCSB PDB 5UQR · PDBe 5UQR · UniProt Q50I20
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