MolNFT v1 · #136343 · protein
Crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from listeria monocytogenes in the complex with imp and Q21
5UPY: “Crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from listeria…”. X-ray diffraction, 3 ligands (IMP, Q21, CL). MolNFT v1 #136343 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UPY
- Type
- protein
- Length
- 350 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q926Y9
- Ligands
- IMP, Q21, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 350 | — | Q926Y9 |
Ligands and binding sites
- IMP · Inosinic acid · ligand · chains A
- Q21 · (2S)-2-(naphthalen-1-yloxy)-N-[2-(pyridin-4-yl)-1,3-benzoxazol-5-yl]propanamide · ligand · chains A
- CL · Chloride ion · ion · chains A
- GOL · Glycerol · additive · 3 copies · chains A
- EDO · 1,2-ethanediol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UPY · Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q926Y9
- Elsewhere: RCSB PDB 5UPY · PDBe 5UPY · UniProt Q926Y9
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