MolNFT v1 · #135837 · protein
The structure of the arabidopsis thaliana TOC75 potra domains
5UAY · Protein TOC75-3, chloroplastic: “The structure of the arabidopsis thaliana TOC75 potra domains”. X-ray diffraction, 3 pockets (best druggability 0.65). MolNFT v1 #135837 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UAY
- Type
- protein
- Length
- 302 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein TOC75-3, chloroplastic
- UniProt
- Q9STE8
- Pockets
- 3 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 31% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein TOC75-3, chloroplastic | protein | 302 | 31% helix, 29% strand | Q9STE8 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 113 | 0.65 | 0.89 | 21 | empty |
| 2 | 305 | 0.57 | 0.77 | 33 | empty |
| 3 | 241 | 0.54 | 0.77 | 35 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 5UAY · The structure of the Arabidopsis thaliana Toc75 POTRA domains · the same entry in another collection · chain A against A, TM-score 1.00
- Q9STE8 · AlphaFold monomer V2.0 prediction for protein TOC75-3, chloroplastic (Q9STE8) · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9STE8
- Elsewhere: RCSB PDB 5UAY · PDBe 5UAY · UniProt Q9STE8
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