MolNFT v1 · #135658 · protein
X-ray crystal structure of the ppargamma ligand binding domain in complex with rivoglitazone
5U5L: “X-ray crystal structure of the ppargamma ligand binding domain in complex with rivoglitazone”. X-ray diffraction, 1 ligand (7VA). MolNFT v1 #135658 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5U5L
- Type
- protein
- Length
- 513 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P37231
- Ligands
- 7VA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 259 | — | P37231 |
| B | — | protein | 254 | — | P37231 |
Ligands and binding sites
- 7VA · (5S)-5-({4-[(6-methoxy-1-methyl-1H-benzimidazol-2-yl) methoxy]phenyl}methyl)-1,3-thiazolidine-2,4-dione · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5U5L · X-ray Crystal Structure of the PPARgamma Ligand Binding Domain in Complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37231
- Elsewhere: RCSB PDB 5U5L · PDBe 5U5L · UniProt P37231
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