MolNFT v1 · #135598 · protein
Human ppardelta ligand-binding domain in complexed with specific agonist 4
5U3T: “Human ppardelta ligand-binding domain in complexed with specific agonist 4”. X-ray diffraction, 2 ligands (7UY, B7G). MolNFT v1 #135598 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5U3T
- Type
- protein
- Length
- 537 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q03181
- Ligands
- 7UY, B7G
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 271 | — | Q03181 |
| B | — | protein | 266 | — | Q03181 |
Ligands and binding sites
- 7UY · 6-[2-({(propan-2-yl)[4-(thiophen-3-yl)benzene-1-carbonyl]amino}methyl)phenoxy]hexanoic acid · ligand · 2 copies · chains A, B
- B7G · heptyl beta-D-glucopyranoside · ligand · 2 copies · chains A, B
- PGO · S-1,2-propanediol · additive · 9 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · 6 copies · chains A, B
- PGE · Triethylene glycol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5U3T · Human PPARdelta ligand-binding domain in complexed with specific agonist 4 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03181
- Elsewhere: RCSB PDB 5U3T · PDBe 5U3T · UniProt Q03181
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