MolNFT v1 · #135585 · RNA
Structure of the dickeya dadantii ykkc riboswitch bound to guanidinium
5U3G: “Structure of the dickeya dadantii ykkc riboswitch bound to guanidinium”. X-ray diffraction, 3 ligands (GAI, MG, K). MolNFT v1 #135585 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5U3G
- Type
- RNA
- Length
- 85 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- GAI, MG, K
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | rna | 85 | — | — |
Ligands and binding sites
- GAI · Guanidine · ligand · chains B
- MG · Magnesium ion · metal · 24 copies · chains B
- K · Potassium ion · metal
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5U3G · Structure of the Dickeya dadantii ykkC riboswitch bound to guanidinium · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5U3G · PDBe 5U3G
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.