MolNFT v1 · #135489 · protein
C-terminal ankyrin repeats from human kidney-type glutaminase (kga) - monoclinic crystal form
5U0J · Glutaminase kidney isoform, mitochondrial: “C-terminal ankyrin repeats from human kidney-type glutaminase (kga) - monoclinic crystal form”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #135489 on GenesisL1: 3D structure, binding…
- PDB
- 5U0J
- Type
- protein
- Length
- 361 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glutaminase kidney isoform, mitochondrial
- EC
- 3.5.1.2
- UniProt
- O94925
- Ligands
- NA
Structure
x-ray diffraction · 2 distinct chains · 57% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | Glutaminase kidney isoform, mitochondrial (EC 3.5.1.2) | protein | 90 | 58% helix, 0% strand | O94925 |
| D | Glutaminase kidney isoform, mitochondrial (EC 3.5.1.2) | protein | 91 | 56% helix, 0% strand | O94925 |
Ligands and binding sites
- NA · Sodium ion · metal · 6 copies · chains A, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
2 interfaces between chains.
- C–D · 836 Ų buried · 14 hydrogen bonds · protein-protein
- A–B · 823 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 5U0J · C-terminal ankyrin repeats from human kidney-type glutaminase (KGA) - monoclinic crystal… · the same entry in another collection · chain A against A, TM-score 1.00
- O94925 · AlphaFold monomer V2.0 prediction for glutaminase kidney isoform, mitochondrial (O94925) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O94925
- Elsewhere: RCSB PDB 5U0J · PDBe 5U0J · UniProt O94925
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