MolNFT v1 · #135381 · protein
Polymorphic form 2 of amyloid-beta derived peptide - ifaedv
5TXH: “Polymorphic form 2 of amyloid-beta derived peptide - ifaedv”. X-ray diffraction. MolNFT v1 #135381 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TXH
- Type
- protein
- Length
- 24 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ifaedv
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | Ifaedv | protein | 6 | 0% helix, 0% strand | — |
Ligands and binding sites
- IPA · Isopropyl alcohol · additive · chains B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
5 interfaces between chains.
- B–C · 261 Ų buried · 9 hydrogen bonds · protein-protein
- A–B · 143 Ų buried · 0 hydrogen bonds · protein-protein
- C–D · 122 Ų buried · 3 hydrogen bonds · protein-protein
- A–C · 107 Ų buried · 2 hydrogen bonds · protein-protein
- B–D · 93 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 5TXH · Polymorphic form 2 of amyloid-beta derived peptide - IFAEDV · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5TXH · PDBe 5TXH
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