MolNFT v1 · #135269 · protein

Crystal structure of staphylococcus epidermidis aap G511-spacer-G513 (consensus G5-spacer-consensus G5)

5TU7 · Accumulation-associated protein aap G511-spacer-G513…: “Crystal structure of staphylococcus epidermidis aap G511-spacer-G513 (consensus G5-spacer-consensus G5)”. X-ray diffraction, 3 pockets (best druggability 0.46). MolNFT v1…

PDB: 5TU7
Type: protein
Length: 259 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Accumulation-associated protein aap G511-spacer-G513 (consensus G5-spacer-consensus G5)
UniProt: Q5HKE8
Pockets: 3 · best druggability 0.46

Structure

x-ray diffraction · 2 distinct chains · 0% helix, 52% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Accumulation-associated protein aap G511-spacer-G513 (consensus G5-spacer-consensus G5)	protein	132	0% helix, 49% strand	Q5HKE8
B	Accumulation-associated protein aap G511-spacer-G513 (consensus G5-spacer-consensus G5)	protein	127	0% helix, 55% strand	Q5HKE8

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	116	0.46	0.78	20	empty
2	72	0.31	0.74	15	empty
3	50	0.23	0.72	10	empty

Interfaces

1 interface between chains.

A–B · 714 Å² buried · 14 hydrogen bonds · protein-protein

Compared structures

5TU7 · Crystal structure of Staphylococcus epidermidis Aap G511-spacer-G513 (consensus… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5HKE8
Elsewhere: RCSB PDB 5TU7 · PDBe 5TU7 · UniProt Q5HKE8

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.