MolNFT v1 · #135263 · protein

Pagf prenyltransferase

5TTY: “Pagf prenyltransferase”. X-ray diffraction, 1 pocket (best druggability 0.71). MolNFT v1 #135263 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5TTY
Type: protein
Length: 297 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pagf prenyltransferase
UniProt: F5B6Z0
Pockets: 1 · best druggability 0.71

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pagf prenyltransferase	protein	297	42% helix, 29% strand	F5B6Z0

Ligands and binding sites

PEG · Di(hydroxyethyl)ether · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	425	0.71	0.81	48	PEG

Compared structures

5TTY · PagF prenyltransferase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt F5B6Z0
Elsewhere: RCSB PDB 5TTY · PDBe 5TTY · UniProt F5B6Z0

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