MolNFT v1 · #135244 · protein

A 1.85A X-ray structure from peptoclostridium difficile 630 of a hypothetical protein

5TTA · Putative exported protein: “A 1.85A X-ray structure from peptoclostridium difficile 630 of a hypothetical protein”. X-ray diffraction, 6 pockets (best druggability 0.66). MolNFT v1 #135244 on GenesisL1: 3D structure, binding sites…

PDB: 5TTA
Type: protein
Length: 426 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative exported protein
UniProt: Q185R5
Pockets: 6 · best druggability 0.66

Structure

x-ray diffraction · 1 distinct chain · 19% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Putative exported protein	protein	213	19% helix, 35% strand	Q185R5

Pockets

6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	614	0.66	0.76	73	empty
2	91	0.37	0.75	12	empty
3	71	0.37	0.77	17	empty
4	70	0.32	0.74	13	empty
5	79	0.30	0.72	17	empty

Interfaces

1 interface between chains.

A–B · 475 Å² buried · 9 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

5TTA · A 1.85A X-Ray Structure from Peptoclostridium difficile 630 of a Hypothetical Protein · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q185R5
Elsewhere: RCSB PDB 5TTA · PDBe 5TTA · UniProt Q185R5

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