MolNFT v1 · #135230 · protein
HIV-1 ca hexamer with NUP153 peptide - R3 crystal form
5TSV: “HIV-1 ca hexamer with NUP153 peptide - R3 crystal form”. X-ray diffraction, 1 ligand (FLU). MolNFT v1 #135230 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TSV
- Type
- protein
- Length
- 438 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P12493, P49790
- Ligands
- FLU
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 209 | — | P12493 |
| B | — | protein | 219 | — | P12493 |
| D | — | protein | 10 | — | P49790 |
Ligands and binding sites
- FLU · 2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)-benzoic acid · ligand · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5TSV · HIV-1 CA hexamer with NUP153 peptide - R3 crystal form · the same entry in another collection · chain A against A, TM-score 1.00
- P49790 · AlphaFold monomer V2.0 prediction for nuclear pore complex protein NUP153 (P49790) · a predicted model of the same protein · chain D against A, TM-score 0.36
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12493
- Every structure of UniProt P49790
- Elsewhere: RCSB PDB 5TSV · PDBe 5TSV · UniProt P12493 · UniProt P49790
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