MolNFT v1 · #134977 · protein

Complex between human CD27 and antibody M2177

5TL5: “Complex between human CD27 and antibody M2177”. X-ray diffraction, 2 ligands (NAG, SO4). MolNFT v1 #134977 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5TL5
Type: protein
Length: 538 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P26842
Ligands: NAG, SO4

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
L	—	protein	217	—	—
H	—	protein	222	—	—
A	—	protein	99	—	P26842

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
SO4 · Sulfate ion · ion · chains H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5TL5 · Complex between human CD27 and antibody M2177 · the same entry in another collection · chain L against L, TM-score 1.00
P26842 · AlphaFold monomer V2.0 prediction for CD27 antigen (P26842) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P26842
Elsewhere: RCSB PDB 5TL5 · PDBe 5TL5 · UniProt P26842

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