MolNFT v1 · #134965 · RNA
RNA heptamer duplex with one 2'-5'-linkage
5TKO: “RNA heptamer duplex with one 2'-5'-linkage”. X-ray diffraction, 1 ligand (CO). MolNFT v1 #134965 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TKO
- Type
- RNA
- Length
- 28 nucleotides
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CO
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | rna | 7 | — | — |
| B, D | — | rna | 7 | — | — |
Ligands and binding sites
- CO · Cobalt (II) ion · metal
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5TKO · RNA heptamer duplex with one 2'-5'-linkage · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5TKO · PDBe 5TKO
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