MolNFT v1 · #134947 · protein
Structure of the hd-domain phosphohydrolase oxsa with oxetanocin-a diphosphate bound
5TK6: “Structure of the hd-domain phosphohydrolase oxsa with oxetanocin-a diphosphate bound”. X-ray diffraction, 2 ligands (7D3, MG). MolNFT v1 #134947 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TK6
- Type
- protein
- Length
- 191 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O24769
- Ligands
- 7D3, MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 191 | — | O24769 |
Ligands and binding sites
- 7D3 · [(2S,3R,4R)-4-(6-amino-9H-purin-9-yl)-3-(hydroxymethyl)oxetan-2-yl]methyl trihydrogen diphosphate · ligand · chains A
- MG · Magnesium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O24769
- Elsewhere: RCSB PDB 5TK6 · PDBe 5TK6 · UniProt O24769
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