MolNFT v1 · #13494 · protein
Crystal structure of the E. COLI glycerol facilitator (glpf) mutation W48F, F200T
1LDF · Glycerol uptake facilitator protein: “Crystal structure of the E. COLI glycerol facilitator (glpf) mutation W48F, F200T”. X-ray diffraction, 1 ligand (MG), 1 pocket (best druggability 0.72). MolNFT v1 #13494 on GenesisL1: 3D…
- PDB
- 1LDF
- Type
- protein
- Length
- 254 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glycerol uptake facilitator protein
- UniProt
- P11244
- Ligands
- MG
- Pockets
- 1 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycerol uptake facilitator protein | protein | 254 | 75% helix, 0% strand | P11244 |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A
- BOG · octyl beta-D-glucopyranoside · additive · 2 copies · chains A
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 395 | 0.72 | 0.83 | 52 | GOL |
Compared structures
- 1LDF · Crystal structure of the E. COLI glycerol facilitator (glpf) mutation W48F, F200T · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11244
- Elsewhere: RCSB PDB 1LDF · PDBe 1LDF · UniProt P11244
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.