MolNFT v1 · #134824 · RNA
Solution structure of parallel stranded adenosine duplex
5TGG · RNA/DNA (5'-D(P*T)-R(*(A2M)P*(A2M)P*(A2M)P*(A2M))-D(P*A)…: “Solution structure of parallel stranded adenosine duplex”. Solution nmr. MolNFT v1 #134824 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TGG
- Type
- RNA
- Length
- 16 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA/DNA (5'-D(P*T)-R(*(A2M)P*(A2M)P*(A2M)P*(A2M))-D(P*A)- R(P*(A2M)P*(A2M)P*(A2M))-3')
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | RNA/DNA (5'-D(P*T)-R(*(A2M)P*(A2M)P*(A2M)P*(A2M))-D(P*A)- R(P*(A2M)P*(A2M)P*(A2M))-3') | rna | 8 | — | — |
Interfaces
1 interface between chains.
- A–B · 690 Ų buried · 36 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 14 modified (nucleotide modification).
Compared structures
- 5TGG · Solution structure of parallel stranded adenosine duplex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5TGG · PDBe 5TGG
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