MolNFT v1 · #134589 · protein
Crystal structure of murine nf-kappab inducing kinase (nik) bound to benzoxepin compound 2
5T8P: “Crystal structure of murine nf-kappab inducing kinase (nik) bound to benzoxepin compound 2”. X-ray diffraction, 2 ligands (774, SO4). MolNFT v1 #134589 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5T8P
- Type
- protein
- Length
- 655 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9WUL6
- Ligands
- 774, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 327 | — | Q9WUL6 |
| B | — | protein | 328 | — | Q9WUL6 |
Ligands and binding sites
- 774 · 6,7-dihydrothieno[4,5]oxepino[1,2-~{c}]pyridine-2-carboxamide · ligand · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5T8P · Crystal structure of murine NF-kappaB inducing kinase (NIK) bound to benzoxepin compound 2 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9WUL6 · AlphaFold monomer V2.0 prediction for mitogen-activated protein kinase kinase kinase 14… · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WUL6
- Elsewhere: RCSB PDB 5T8P · PDBe 5T8P · UniProt Q9WUL6
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