MolNFT v1 · #134465 · DNA
Crystal structure of a DNA sequence D (cgtgaattcacg) with dapi
5T4W: “Crystal structure of a DNA sequence D (cgtgaattcacg) with dapi”. X-ray diffraction, 1 ligand (DAP). MolNFT v1 #134465 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5T4W
- Type
- DNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- DAP
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | dna | 12 | — | — |
Ligands and binding sites
- DAP · 6-amidine-2-(4-amidino-phenyl)indole · ligand · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5T4W · Crystal structure of a DNA sequence d (CGTGAATTCACG) with DAPI · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5T4W · PDBe 5T4W
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