MolNFT v1 · #134341 · protein + RNA
Crystal structure of yeast RNase III (RNT1P) complexed with a non- hydrolyzable RNA substrate analog
5T16: “Crystal structure of yeast RNase III (RNT1P) complexed with a non- hydrolyzable RNA substrate analog”. X-ray diffraction. MolNFT v1 #134341 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5T16
- Type
- protein + RNA
- Length
- 2,142 residues
- Chains
- 16
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q02555
Structure
x-ray diffraction · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, I | — | protein | 276 | — | Q02555 |
| B | — | protein | 269 | — | Q02555 |
| C | — | protein | 113 | — | Q02555 |
| D, L | — | protein | 116 | — | Q02555 |
| E, F | — | protein | 115 | — | Q02555 |
| G, H, O, P | — | rna | 34 | — | — |
| J | — | protein | 267 | — | Q02555 |
| K | — | protein | 114 | — | Q02555 |
| M | — | protein | 112 | — | Q02555 |
| N | — | protein | 117 | — | Q02555 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 10 copies · chains A, E, F, H, I, J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5T16 · Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA… · the same entry in another collection · chain I against I, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02555
- Elsewhere: RCSB PDB 5T16 · PDBe 5T16 · UniProt Q02555
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