MolNFT v1 · #13415 · protein + DNA

Uracil-DNA glycosylase

1LAU · DNA (5'-D(*TP*TP*T)-3'): “Uracil-DNA glycosylase”. X-ray diffraction, 1 pocket (best druggability 0.41). MolNFT v1 #13415 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1LAU
Type: protein + DNA
Length: 231 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA (5'-D(*TP*TP*T)-3'); Protein (uracil-DNA glycosylase (E.C.3.2.2.-))
UniProt: P10186
Pockets: 1 · best druggability 0.41

Structure

x-ray diffraction · 2 distinct chains · 43% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
D	DNA (5'-D(TPTP*T)-3')	dna	3	—	—
E	Protein (uracil-DNA glycosylase (E.C.3.2.2.-))	protein	228	43% helix, 11% strand	P10186

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	122	0.41	0.76	22	empty

Interfaces

1 interface between chains.

D–E · 413 Å² buried · 8 hydrogen bonds · protein-nucleic

Compared structures

1LAU · Uracil-DNA glycosylase · the same entry in another collection · chain D against D, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P10186
Elsewhere: RCSB PDB 1LAU · PDBe 1LAU · UniProt P10186

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