MolNFT v1 · #134134 · protein
Crystal structure of mxaj from methlophaga aminisulfidivorans mpt
5SV6 · Extracellular solute-binding protein, family 3: “Crystal structure of mxaj from methlophaga aminisulfidivorans mpt”. X-ray diffraction, 1 ligand (BR), 2 pockets (best druggability 0.68). MolNFT v1 #134134 on GenesisL1: 3D structure…
- PDB
- 5SV6
- Type
- protein
- Length
- 246 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Extracellular solute-binding protein, family 3
- UniProt
- A3FJ49
- Ligands
- BR
- Pockets
- 2 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Extracellular solute-binding protein, family 3 | protein | 246 | 35% helix, 25% strand | A3FJ49 |
Ligands and binding sites
- BR · Bromide ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 320 | 0.68 | 0.82 | 31 | empty |
| 2 | 89 | 0.43 | 0.78 | 21 | empty |
Modifications
Observed in the structure: 7 modified, 1 disulfide (engineered, disulfide).
Compared structures
- 5SV6 · Crystal structure of MxaJ from Methlophaga aminisulfidivorans MPT · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3FJ49
- Elsewhere: RCSB PDB 5SV6 · PDBe 5SV6 · UniProt A3FJ49
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.