MolNFT v1 · #134111 · protein

Crystal structure of uncharacterized protein LPG2148 from legionella pneumophila

5SUJ: “Crystal structure of uncharacterized protein LPG2148 from legionella pneumophila”. X-ray diffraction, 6 pockets (best druggability 0.80). MolNFT v1 #134111 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5SUJ
Type: protein
Length: 757 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein
UniProt: Q5ZTL3
Pockets: 6 · best druggability 0.80

Structure

x-ray diffraction · 2 distinct chains · 50% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein	protein	377	50% helix, 14% strand	Q5ZTL3
B	Uncharacterized protein	protein	380	50% helix, 14% strand	Q5ZTL3

Pockets

6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1141	0.80	0.82	91	empty
2	99	0.51	0.82	22	empty
3	104	0.47	0.80	20	empty
4	54	0.36	0.79	12	empty
5	58	0.32	0.76	13	empty

Interfaces

1 interface between chains.

A–B · 935 Å² buried · 21 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 18 modified (engineered).

Compared structures

5SUJ · Crystal structure of uncharacterized protein LPG2148 from Legionella pneumophila · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5ZTL3
Elsewhere: RCSB PDB 5SUJ · PDBe 5SUJ · UniProt Q5ZTL3

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