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MolNFT v1 · #133663 · protein

Xchem group deposition -- crystal structure of human ACVR1 in complex with FM000329D

5S7B: “Xchem group deposition -- crystal structure of human ACVR1 in complex with FM000329D”. X-ray diffraction, 3 ligands (LU8, XH7, SO4). MolNFT v1 #133663 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5S7B
Type
protein
Length
577 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q04771
Ligands
LU8, XH7, SO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein285—Q04771
B—protein292—Q04771

Ligands and binding sites

  • LU8 · 4-methyl-3-[4-(1-methylpiperidin-4-yl)phenyl]-5-(3,4,5-trimethoxyphenyl)pyridine · ligand · 4 copies · chains A, B
  • XH7 · (3R)-thiolane-3-carboxylic acid · ligand · 3 copies · chains A, B
  • SO4 · Sulfate ion · ion · 5 copies · chains A, B
  • EDO · 1,2-ethanediol · additive · 12 copies · chains A, B
  • DMS · Dimethyl sulfoxide · additive · 2 copies · chains A, B
  • TAR · D(-)-tartaric acid · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5S7B · XChem group deposition -- Crystal Structure of human ACVR1 in complex with FM000329d · the same entry in another collection · chain A against A, TM-score 1.00
  • Q04771 · AlphaFold monomer V2.0 prediction for activin receptor type-1 (Q04771) · a predicted model of the same protein · chain A against A, TM-score 0.95

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