MolNFT v1 · #13311 · protein
X-ray structure of galactose mutarotase from lactococcus lactis (apo)
1L7J: “X-ray structure of galactose mutarotase from lactococcus lactis (apo)”. X-ray diffraction, 8 pockets (best druggability 0.76). MolNFT v1 #13311 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1L7J
- Type
- protein
- Length
- 676 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Galactose mutarotase
- EC
- 5.1.3.3
- UniProt
- Q9ZB17
- Pockets
- 8 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Galactose mutarotase (EC 5.1.3.3) | protein | 338 | 8% helix, 44% strand | Q9ZB17 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.76 | 0.98 | 31 | empty |
| 2 | 197 | 0.64 | 0.83 | 35 | empty |
| 3 | 163 | 0.62 | 0.84 | 29 | empty |
| 4 | 152 | 0.47 | 0.77 | 23 | empty |
| 5 | 111 | 0.47 | 0.80 | 28 | empty |
Interfaces
1 interface between chains.
- A–B · 1030 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 1L7J · X-ray structure of galactose mutarotase from Lactococcus lactis (apo) · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ZB17
- Elsewhere: RCSB PDB 1L7J · PDBe 1L7J · UniProt Q9ZB17
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