MolNFT v1 · #132647 · protein
Pandda analysis group deposition -- crystal structure of human NUDT22 in complex with N13542A
5R58: “Pandda analysis group deposition -- crystal structure of human NUDT22 in complex with N13542A”. X-ray diffraction, 1 ligand (S0S). MolNFT v1 #132647 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5R58
- Type
- protein
- Length
- 291 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9BRQ3
- Ligands
- S0S
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 291 | — | Q9BRQ3 |
Ligands and binding sites
- S0S · (3~{R},4~{R})-1,1-bis(oxidanylidene)-4-(pyridin-3-ylmethylamino)thiolan-3-ol · ligand · chains A
- DMS · Dimethyl sulfoxide · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5R58 · PanDDA analysis group deposition -- Crystal Structure of human NUDT22 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9BRQ3 · AlphaFold monomer V2.0 prediction for uridine diphosphate glucose pyrophosphatase NUDT22… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BRQ3
- Elsewhere: RCSB PDB 5R58 · PDBe 5R58 · UniProt Q9BRQ3
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