MolNFT v1 · #132361 · protein

Structure of unliganded HUMRADA1.6

5QUN: “Structure of unliganded HUMRADA1.6”. X-ray diffraction, 1 ligand (PO4), 2 pockets (best druggability 0.56). MolNFT v1 #132361 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5QUN
Type: protein
Length: 223 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Rada
Ligands: PO4
Pockets: 2 · best druggability 0.56

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rada	protein	223	39% helix, 26% strand	—

Ligands and binding sites

PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	127	0.56	0.83	24	empty
2	92	0.37	0.76	17	PO4

Compared structures

5QUN · Structure of unliganded HumRadA1.6 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 5QUN · PDBe 5QUN

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