MolNFT v1 · #13118 · protein
Crystal structure of aprtase from giardia lamblia complexed with 9- deazaadenine
1L1Q · Adenine phosphoribosyltransferase: “Crystal structure of aprtase from giardia lamblia complexed with 9- deazaadenine”. X-ray diffraction, 2 ligands (9DA, SO4), 1 pocket (best druggability 0.61). MolNFT v1 #13118 on GenesisL1: 3D…
- PDB
- 1L1Q
- Type
- protein
- Length
- 181 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Adenine phosphoribosyltransferase
- EC
- 2.4.2.7
- UniProt
- Q967M2
- Ligands
- 9DA, SO4
- Pockets
- 1 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Adenine phosphoribosyltransferase (EC 2.4.2.7) | protein | 181 | 35% helix, 31% strand | Q967M2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 154 | 0.61 | 0.84 | 37 | SO4, 9DA |
Compared structures
- 1L1Q · Crystal Structure of APRTase from Giardia lamblia Complexed with 9-deazaadenine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q967M2
- Elsewhere: RCSB PDB 1L1Q · PDBe 1L1Q · UniProt Q967M2
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