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MolNFT v1 · #1306 · DNA

DNA duplex containing a purine-rich strand, NMR, 6 structures

1AXP · DNA (D(GAAGAGAAGC)(DOT)D(GCTTCTCTTC)): “DNA duplex containing a purine-rich strand, NMR, 6 structures”. Solution nmr. MolNFT v1 #1306 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1AXP
Type
DNA
Length
20 nucleotides
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
DNA (D(GAAGAGAAGC)(DOT)D(GCTTCTCTTC))

Structure

solution nmr · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA (D(GAAGAGAAGC)(DOT)D(GCTTCTCTTC))dna10——
BDNA (D(GAAGAGAAGC)(DOT)D(GCTTCTCTTC))dna10——

Interfaces

1 interface between chains.

  • A–B · 429 Ų buried · 43 hydrogen bonds · nucleic-nucleic

Compared structures

  • 1AXP · DNA duplex containing a purine-rich strand, NMR, 6 structures · the same entry in another collection · chain A against A, TM-score 1.00

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