MolNFT v1 · #12970 · protein

Sindbis virus capsid, (wild-type) residues 106-264, tetragonal crystal form

1KXA · Sindbis virus capsid protein: “Sindbis virus capsid, (wild-type) residues 106-264, tetragonal crystal form”. X-ray diffraction, 2 pockets (best druggability 0.37). MolNFT v1 #12970 on GenesisL1: 3D structure, binding sites and…

PDB: 1KXA
Type: protein
Length: 158 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Sindbis virus capsid protein
EC: 3.4.21.-
UniProt: P03316
Pockets: 2 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Sindbis virus capsid protein (EC 3.4.21.-)	protein	158	6% helix, 47% strand	P03316

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	68	0.37	0.77	14	empty
2	63	0.29	0.74	13	empty

Compared structures

1KXA · Sindbis virus capsid, (wild-type) residues 106-264, tetragonal crystal form · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03316
Elsewhere: RCSB PDB 1KXA · PDBe 1KXA · UniProt P03316

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